Chemistry Central Journal

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PocketPicker: analysis of ligand binding-sites with shape descriptors

Martin Weisel, Ewgenij Proschak and Gisbert Schneider*

Chemistry Central Journal 2007, 1:7 doi:10.1186/1752-153X-1-7

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Proceedings   Open Access

A new protein-ligand binding sites prediction method based on the integration of protein sequence conservation information

Tianli Dai, Qi Liu, Jun Gao, Zhiwei Cao, Ruixin Zhu BMC Bioinformatics 2011, 12(Suppl 14):S9 (14 December 2011)

Research article   Open Access Highly Accessed

Prediction of functionally important residues in globular proteins from unusual central distances of amino acids

Marek Kochańczyk BMC Structural Biology 2011, 11:34 (18 September 2011)

Review   Open Access

Recent advances in B-cell epitope prediction methods

Yasser EL-Manzalawy, Vasant Honavar Immunome Research 2010, 6(Suppl 2):S2 (3 November 2010)

Research article   Open Access

Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble

Edon Sung, Sangsoo Kim, Whanchul Shin BMC Bioinformatics 2010, 11:256 (18 May 2010)

Poster presentation   Open Access

Where are the boundaries? Automated pocket detection for druggability studies

Andrea Volkamer, T Grombacher, Matthias Rarey Journal of Cheminformatics 2010, 2(Suppl 1):P11 (4 May 2010)

Research article   Open Access Highly Accessed

Identification of recurring protein structure microenvironments and discovery of novel functional sites around CYS residues

Shirley Wu, Tianyun Liu, Russ B Altman BMC Structural Biology 2010, 10:4 (2 February 2010)

Poster presentation   Open Access

PocketGraph: graph representation of binding site volumes

M Weisel, J Kriegl, G Schneider Chemistry Central Journal 2009, 3(Suppl 1):P66 (5 June 2009)

Poster presentation   Open Access

Fuzzy virtual ligands for virtual screening

M Löwer, Y Tanrikulu, M Weisel, G Schneider Chemistry Central Journal 2009, 3(Suppl 1):P63 (5 June 2009)

Software   Open Access Highly Accessed

VASCo: computation and visualization of annotated protein surface contacts

Georg Steinkellner, Robert Rader, Gerhard G Thallinger, Christoph Kratky, Karl Gruber BMC Bioinformatics 2009, 10:32 (24 January 2009)